4 1352 S. solfat ATTCCGGTTGATCCTGCCGGACCGACCGCTTCGGGGTAGATAAGCCATGGGAGTCTTACA AGGTGTGGCGGACGGCTGAGTAACACGTGGCAACCTACCCTCGGGACGGGGATAACCCCG GGAAACTGGGGATAATCCCCGAGGGAAGACCCTAAAGGCTTCCCCCCGAGGATGGGGCTA CGGCCCATCAGGCTGTCGGTGGGGTAAAGGCCCACCGAACCTATAACGGGTAGGGGCCGT GGAAGCGGGAGCCTCCAGTTGGGCACTGAGACAAGGGCCCAGGCCCTACGGGCGCACCAG GCGCGAAACGTCCCCAATGCGCGAAGCGTGAGGGCGCTACCCCGAGTGCCTCCCAGGAGT TTTCCCCGCAAAAAGGCGGGGGAATAAGCGGGGGGCAAGTTGGTGTCAGCCGCCGCGGTA ATACCAGCTCCGCGAGTGGTCGGGGTGATTACTGGGCCTAAAGCGCCTGTAGCCGGCCAC CTTAAAGTCCCGCTCAACCGGAAGGGGCGAACTTGGGCTAGGGGGCGGGAGAGGCGGGGG GTACTCCCGGAGTAGGGGCGAAATCCAGATACCGGGAGGACCACCAGTGGCGGAAGCGCC CCGCTAGAACGCGCCCGACGGTGAGAGGCGAAAGCCGGGGCAGCAAACGGGATTAGATAC CCCGGTAGTCCCGGCTGTAAACGATGCGGGCTAGGTGTCGAGTAGGCAGCCTACTCGGGC CGCAGGGAAGCCGAAGCCCGCCTGGGGAGTACGGTCGCAAGACTGAAACTTAAAGGAATT GGCGGGGGAGCACACAAGGGGTGGAACCTGCGGCTCAATTGGAGTCAACGCCTGGAATCT TACCGGGGGAGACCCAGTTGACGGCCAGGAACGACCCTGACTCGGGAAGGAGGTGCATGG CCGTCGCCAGCTCGTGTTGTGAAATGTCCGGTTAAGTCCGGCAACGAGCGAGACCCCACC CCTAGTTGGTATTCTAGAACCACACTAGGGGGACTGCCGGCGTAAGCCGGAGAAGGAGGG GCCACGGCAGGTCAGCATGCCCCGAAACTCCCGGGCCGCACGCGGGTTACAATGGCAGGG ACAACGGGATGCTACCTCGAAAGGGGGAGCCAATCCTTAAACCCTGCCGCAGTTGGGATC GAGGGCTGAAACCCGCCCTCGTGAACGAGGAATCCCTAGTAACCGCGGGTCAACAACCCG CGGTGAATACGTCCCTGCTCCTTGCACACACCGCCCGTCGCTCCACCCGAGCGCGAAAGG GGTGAGGTCCCTTAAGGGGATCGAACTCCTTCCCGCGAGGGGGGAGAAGTCGTAACAAGG TAGCCGTAGGGGAACCTGCGGCTGGATCACCT H. salin ATTCCGGTTGATCCTGCCGGAGGCATTGCTTCGGAGTCCTTTAGCCATGCTAGTTGTGCG ACCCGCAGCGGAAAGCTCAGTAACACGTGGCAAGCTACCCTGTGGACGGGAATACTCTCG GGAAACTGAGGCTAATCCCCGAACGCTGACCGGAAACGCCCGCGCCACAGGATGCGGCTG CGGTCGATTAGGTAGACGGTGGGGTAACGGCCCACCGTGCCCATAATCGGTACGGGTTGT GAGAGCAAGAGCCCGGAGACGGAATCTGAGACAAGATTCCGGGCCCTACGGGCGCAGCAG GCGCGAAACCTTTACACTGTACGAAGTGCGATAAGGGGACTCCGAGTGTGAGCTAGCTCT TTTGTACACAAGGTGGTGCACGAATAAGGACTGGGCAAGACGGTGCCAGCCGCCGCGGTA ATACCGGCAGTCCGAGTGATGGCCGATCTTATTGGGCCTAAAGCGTCCGTAGCTGGTGAA CGGAAATCGTCCCTTAACGCAGGCCAGGGAACTTCAGCTTGGGACCGGAAGACCTGAGGG GTACGTCTGGGGTAGGAGTGAAATCCTAATCCTGGACGGACCGCCGGTGGCGAAAGCGCC TCAGGAGAACGGATCCGACAGTGAGGGACGAAAGCTAGGGTCTCGAACCGGATTAGATAC CCGGGTAGTCCTAGCTGTAAACGATGTCCGCTAGGTGTGGCGCAGGCAGCCTGCGCTGGC CGTAGGGAAGCCGAAGCGCGCCTGGGAAGTACGTCTGCAAGGATGAAACTTAAAGGAATT GGCGGGGGAGCATACAACCGGAGGAGCCTGCGGTTTAATTGGACTCAACGCCGGACATCT CACCAGCCCCGACATAGTTGACGGTCAGGGATGACCCGGAGCTATGAAGGAGGTGCATGG CCGCCGTCAGCTCGTACCGTGAGGCGTCCTGTTAAGTCAGGCAACGAGCGAGACCCGACT CCTAATTGCCAGCAGCTGGGTACATTAGGTGGACTGCCGCTGCAAAGCGGAGAAGGAACG GCAACGGTAGGTCAGTATGCCCCGAATGGGCTGGGCAACACGCGGGCTACAATGGTCGAG ACAATGGGAAGCCACTCCGAGAGGAGGCGCTAATCTCTAAACTCGATCGTAGTTCGGATT GAGGGCTGAAACTCGCCCTCATGAAGCTGGATTCGGTAGTAATCGCGTGTCAGCAGCGCG CGGTGAATACGTCCCTGCTCCTTGCACACACCGCCCGTCAAATCACCCGAGTGGGGTTCG GATGAGGCCGGCTGCGCTGGTCAAATCTGGCTCCGCAAGGGGGATTAAGTCGTAACAAGG TAGCCGTAGGGGAATCTGCGGCTGGATCACCT E. coli GAAGAGTTTGATCATGGCTCAGATAACGCTGCGGCAGGCCTAACACATGCAAGTCGAACG CTTAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACT GGAAACGGTAGCTAATACCGCAACGTCGCGACCAAAGAGTTCTTCCATCGGATGTGCCCA GATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCT GAGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGAGGCAGCAG TGGGGAATATTGCACAATGGGCGCAGCCTGATGCAGCCATGCCGCGTGTATCCTCGGGTT TTCAGCGGGAATTTACCCGCAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTA ATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTGT TTGAAATCCCGGCTCAACCGGAACATCTGAACTCAAGCTTGAGTCTCGTAGAGGGGGGTA GAATTCCAGGTGTAGCGGTGAAATGCTAAGATCTGGAGGAATACCGGTGGCGAAGGCGGC CCCCTGGACGAAGACTGACGCTCAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATAC CCTGGTAGTCCACGCCGTAAACGATGTCGACTTGGAGGTTGTGCCCTTGAGGCGTGGCTC CGGAGCTAACGCGAAGTCCGCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAATGAATT GACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCT TACCTGGTCTGACAACGGAAGTTTTCAGAGATGTGCTGGACCGTAGAAGGTGCTGCATGG CTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTATC CTTTGTTGCCAGCGGCCGGGAACTCAAAGGAGACTGCCAGTGTAAACTGGAGAAGGTGGG ATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGCGCAT ACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCTAAAGTGCGTCGTAGTCCGGATT GGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGGATCAGAATGCCA CGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCA AAAGAAGTAGGTTCGCGCTTACCACTTTGTATTCATGACTGGGGTGAAGTCGTAACAAGG TAACCGTAGGGGAACCTGCGGTTGGATCACCT H. sapiens TACCTGGTTGATCCTGCCAGTAGATATGCTTGTCTCAAATTAAGCCATGCATGTCTAAGT GCCAACTGCGAATGGCTCATTAAATCAGTTAGGTTCCTTTGGTCGACTTGGATAACTGTG GTAATCTAGAGCTAATACATGCACGGGGCGGGCCGACGCCCCACGACCCATTCGAACGTC TGCCCTATCAACTTGATGGTAGTCGCCGTGCCTACCATGGTGACCACGGGTACGGGGAAT CAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGAAGGCAGCAG GCGCGCAAATTACCCACTCCCGACCCGGGGAGGTAGTGACGAAAAATACAACTTTGCTGG AGTCCACTTAAATTTAACGAGGATCCATTGGAGGGCAAGTTGGTGCCAGCAGCCGCGGTA ATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGGGAG CGGGCGGGCGGTCTATTTTGTTGTTTTGGAACTGAGGCATGATTAAGGAGGCCGGGGGCC GTATTGCGCCGCTAGAGGTGAAATTCTGACCGGCGCAAGACGGACCAGAGCGAAAGCATT TGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATAC CGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGACCCGCCGGGCAG CTTCGGGAAACCAAAGTCGTTCCGGGGAGTATGGTTGCAAAGCTGAAACTTAAAGGAATT GACGGAAGGGCACACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGAAACCT CACCCGGCCCGACACGGAGGATTGACAGAGATAGCCCCGATCCGTGGTGGTGGTGCATGG CCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGATAACGAACGAGACTCTGAT GCTAACTAGTTACGCCCCAACTTCTTAGAGGGACAAGTGGCGTCAGCCACCCGAGATTGA GCAATAACAGGTCTGTATGCCCTTAGTGTCCGGGGCTGCACGCGCGCTACACTGACTGGC TCAGCGTGACCCTACGCCGGCAGGCGCGGGTAACCCGGAACCCCATTCGTGATGGGGATC GGGGATTGCAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTG CGTTGATTAAGTCCCTGCCCTTTGTACACACCGCCCGTCGCTACTACCGATGGATGGTTT AGTGAGGCCCTCGGGGACGGTCGAACTTGATATCTAGAGGAAGTAAAAGTCGTAACAAGG TTTCCGTAGGTGAACCTGCGGAAGGATCATTA // end of file Data from Navadi et al. (1991) and analyzed by Yang & Roberts (1995) under nonstationary models. The tree is (((S. solfat, H. sapiens), H. salin), E. coli); Navidi, W. C., G. A. Churchill, and A. von Haeseler. 1991. Methods for inferring phylogenies from nucleic acid sequence data by using maximum likelihood and linear invariants. Mol Biol Evol 8:128-143.