9 888 human AAGCTTCACC GGCGCAGTCA TTCTCATAAT CGCCCACGGA CTTACATCCT CATTACTATT 60 CTGCCTAGCA AACTCAAACT ACGAACGCAC TCACAGTCGC ATCATAATCC TCTCTCAAGG 120 ACTTCAAACT CTACTCCCAC TAATAGCTTT TTGATGACTT CTAGCAAGCC TCGCTAACCT 180 CGCCTTACCC CCCACTATTA ACCTACTGGG AGAACTCTCT GTGCTAGTAA CCACGTTCTC 240 CTGATCAAAT ATCACTCTCC TACTTACAGG ACTCAACATA CTAGTCACAG CCCTATACTC 300 CCTCTACATA TTTACCACAA CACAATGGGG CTCACTCACC CACCACATTA ACAACATAAA 360 ACCCTCATTC ACACGAGAAA ACACCCTCAT GTTCATACAC CTATCCCCCA TTCTCCTCCT 420 ATCCCTCAAC CCCGACATCA TTACCGGGTT TTCCTCTTGT AAATATAGTT TAACAAAACA 480 TCAGATTGTG AATCTGACAA CAGAGGCTTA CGCCCCTTAT TTACCGAGAA AGCTCACAAG 540 AACTGCTAAC TCATGCCCCA TGTCTGACAA CATGGCTTTC TCACTTTTAA AGGATAACAG 600 CTATCCATTG GTCTTAGGCC CCAAAAATTT GGTGCAACTC CAAATAAAAG TAATAATGCA 660 CACTACTATA ACCACCCTAA CCCTGACTTC CCTAATTCCC CCCATCCTTA CCACCCTCGT 720 TAACCCTAAC AAAAAAAACT CATACCCCCA TTATGTAAAA TCCATTGTCG CATCCACCTT 780 TATTATCAGT CTCTTCCCCA CAACAATATT CATGTGCCTA GACCAAGAAG TTATTATCTC 840 GAACTGACAC TGAGCCACAA CCCAAACAAC CCAGCTCTCC CTAAGCTT 888 chimpanzee AAGCTTCACC GGCGCAATTA TCCTCATAAT CGCCCACGGA CTTACATCCT CATTATTATT 60 CTGCCTAGCA AACTCAAATT ATGAACGCAC CCACAGTCGC ATCATAATTC TCTCCCAAGG 120 ACTTCAAACT CTACTCCCAC TAATAGCCTT TTGATGACTC CTAGCAAGCC TCGCTAACCT 180 CGCCCTACCC CCTACCATTA ATCTCCTAGG GGAACTCTCC GTGCTAGTAA CCTCATTCTC 240 CTGATCAAAT ACCACTCTCC TACTCACAGG ATTCAACATA CTAATCACAG CCCTGTACTC 300 CCTCTACATG TTTACCACAA CACAATGAGG CTCACTCACC CACCACATTA ATAACATAAA 360 GCCCTCATTC ACACGAGAAA ATACTCTCAT ATTTTTACAC CTATCCCCCA TCCTCCTTCT 420 ATCCCTCAAT CCTGATATCA TCACTGGATT CACCTCCTGT AAATATAGTT TAACAAAACA 480 TCAGATTGTG AATCTGACAA CAGAGGCTCA CGCCCCTTAT TTACCGAGAA AGCTTATAAG 540 AACTGCTAAT TCATATCCCA TGCCTGACAA CATGGCTTTC TCACTTTTAA AGGATAACAG 600 CCATCCGTTG GTCTTAGGCC CCAAAAATTT GGTGCAACTC CAAATAAAAG TAATAATGTA 660 TACTACCATA ACCACCTTAA CCCTAACTCC CTTAATTCTC CCCATCCTCA CCACCCTCAT 720 TAACCCTAAC AAAAAAAACT CATATCCCCA TTATGTGAAA TCCATTATCG CGTCCACCTT 780 TATCATTAGC CTTTTCCCCA CAACAATATT CATATGCCTA GACCAAGAAG CTATTATCTC 840 AAACTGGCAC TGAGCAACAA CCCAAACAAC CCAGCTCTCC CTAAGCTT 888 gorilla AAGCTTCACC GGCGCAGTTG TTCTTATAAT TGCCCACGGA CTTACATCAT CATTATTATT 60 CTGCCTAGCA AACTCAAACT ACGAACGAAC CCACAGCCGC ATCATAATTC TCTCTCAAGG 120 ACTCCAAACC CTACTCCCAC TAATAGCCCT TTGATGACTT CTGGCAAGCC TCGCCAACCT 180 CGCCTTACCC CCCACCATTA ACCTACTAGG AGAGCTCTCC GTACTAGTAA CCACATTCTC 240 CTGATCAAAT ACCACCCTTT TACTTACAGG ATCTAACATA CTAATCACAG CCCTGTACTC 300 CCTTTATATA TTTACCACAA CACAATGAGG CCCACTCACA CACCACATCA CCAACATAAA 360 ACCCTCATTT ACACGAGAAA ACATCCTCAT ATTCATGCAC CTATCCCCCA TCCTCCTCCT 420 ATCCCTCAAC CCCGATATTA TCACCGGGTT CACCTCCTGT AAATATAGTT TAACAAAACA 480 TCAGATTGTG AATCTGATAA CAGAGGCTCA CACCCCTTAT TTACCGAGAA AGCTCGTAAG 540 AGCTGCTAAC TCATACCCCG TGCTTGACAA CATGGCTTTC TCACTTTTAA AGGATAACAG 600 CTATCCATTG GTCTTAGGAC CCAAAAATTT GGTGCAACTC CAAATAAAAG TAATAATGTA 660 CGCTACCATA ACCACCTTAG CCCTAACTTC CTTAATTCCC CCTATCCTTA CCACCTTCAT 720 CAATCCTAAC AAAAAAAGCT CATACCCCCA TTACGTAAAA TCTATCGTCG CATCCACCTT 780 TATCATCAGC CTCTTCCCCA CAACAATATT TCTATGCCTA GACCAAGAAG CTATTATCTC 840 AAGCTGACAC TGAGCAACAA CCCAAACAAT TCAACTCTCC CTAAGCTT 888 orangutan AAGCTTCACC GGCGCAACCA CCCTCATGAT TGCCCATGGA CTCACATCCT CCCTACTGTT 60 CTGCCTAGCA AACTCAAACT ACGAACGAAC CCACAGCCGC ATCATAATCC TCTCTCAAGG 120 CCTTCAAACT CTACTCCCCC TAATAGCCCT CTGATGACTT CTAGCAAGCC TCACTAACCT 180 TGCCCTACCA CCCACCATCA ACCTTCTAGG AGAACTCTCC GTACTAATAG CCATATTCTC 240 TTGATCTAAC ATCACCATCC TACTAACAGG ACTCAACATA CTAATCACAA CCCTATACTC 300 TCTCTATATA TTCACCACAA CACAACGAGG TACACCCACA CACCACATCA ACAACATAAA 360 ACCTTCTTTC ACACGCGAAA ATACCCTCAT GCTCATACAC CTATCCCCCA TCCTCCTCTT 420 ATCCCTCAAC CCCAGCATCA TCGCTGGGTT CGCCTACTGT AAATATAGTT TAACAAAACA 480 TTAGATTGTG AATCTAATAA TAGGGCCCCA CACCCCTTAT TTACCGAGAA AGCTCACAAG 540 AACTGCTAAC TCTCACTCCA TGTGTGACAA CATGGCTTTC TCGCTTTTAA AGGATAACAG 600 CTATCCCTTG GTCTTAGGAT CCAAAAATTT GGTGCAACTC CAAATAAAAG TAACAATGTT 660 TACCACCATA ACTGCCCTCA CCTTAACTTC CCTAATCCCC CCCATTACCG CTACCCTCAT 720 TAACCCCAAC AAAAAAAACC CATACCCCCA CTATGTAAAA ACGGCCATCG CATCCGCCTT 780 TACTATCAGC CTTATCCCAA CAACAATATT TATCTGCCTA GGACAAGAAA CCATCGTCAC 840 AAACTGATGC TGAACAACCA CCCAGACACT ACAACTCTCA CTAAGCTT 888 gibbon AAGCTTTACA GGTGCAACCG TCCTCATAAT CGCCCACGGA CTAACCTCTT CCCTGCTATT 60 CTGCCTTGCA AACTCAAACT ACGAACGAAC TCACAGCCGC ATCATAATCC TATCTCGAGG 120 GCTCCAAGCC TTACTCCCAC TGATAGCCTT CTGATGACTC GCAGCAAGCC TCGCTAACCT 180 CGCCCTACCC CCCACTATTA ACCTCCTAGG TGAACTCTTC GTACTAATGG CCTCCTTCTC 240 CTGGGCAAAC ACTACTATTA CACTCACCGG GCTCAACGTA CTAATCACGG CCCTATACTC 300 CCTTTACATA TTTATCATAA CACAACGAGG CACACTTACA CACCACATTA AAAACATAAA 360 ACCCTCACTC ACACGAGAAA ACATATTAAT ACTTATGCAC CTCTTCCCCC TCCTCCTCCT 420 AACCCTCAAC CCTAACATCA TTACTGGCTT TACTCCCTGT AAACATAGTT TAATAAAACA 480 TTAGATTGTG AATCTAACAA TAGAGGCTCG AACCTCTTGC TTACCGAGAA AGCCCACAAG 540 AACTGCTAAC TCACTATCCA TGTATGACAA CATGGCTTTC TCACTTTTAA AGGATAACAG 600 CTATCCATTG GTCTTAGGAC CCAAAAATTT GGTGCAACTC CAAATAAAAG TAATAATGTA 660 CACCACCATA GCCATTCTAA CGCTAACCTC CCTAATTCCC CCCATTACAG CCACCCTTAT 720 TAACCCCAAT AAAAAGAACT TATACCCGCA CTACGTAAAA ATGACCATTG CCTCTACCTT 780 TATAATCAGC CTATTTCCCA CAATAATATT CATGTGCACA GACCAAGAAA CCATTATTTC 840 AAACTGACAC TGAACTGCAA CCCAAACGCT AGAACTCTCC CTAAGCTT 888 ce macaque AAGCTTCTCC GGCGCAACCA CCCTTATAAT CGCCCACGGG CTCACCTCTT CCATGTATTT 60 CTGCTTGGCC AATTCAAACT ATGAGCGCAC TCATAACCGT ACCATACTAC TATCCCGAGG 120 ACTTCAAATT CTACTTCCAT TGACAGCCTT CTGATGACTC ACAGCAAGCC TTACTAACCT 180 TGCCCTACCC CCCACTATTA ATCTACTAGG CGAACTCTTT GTAATCACAA CTTCATTTTC 240 CTGATCCCAT ATCACCATTG TGTTAACGGG CCTTAATATA CTAATCACAG CCCTCTACTC 300 TCTCCACATG TTCATTACAG TACAACGAGG AACACTCACA CACCACATAA TCAATATAAA 360 ACCCCCCTTC ACACGAGAAA ACATATTAAT ATTCATACAC CTCGCTCCAA TTATCCTTCT 420 ATCTCTCAAC CCCAACATCA TCCTGGGGTT TACCTCCTGT AAATATAGTT TAACAAAACA 480 TTAGATTGTG AATCTAACTA TAGAGGCCTA CCCTTCTTAT TTACCGAGAA AACTCGCAAG 540 GACTGCTAAT CCATGCCCCG TACTTAAAAC TACGGTTTCC TCACTTTTAA AGGATAACAG 600 CTATCCATTG ACCTTAGGAG TCAAAAAATT GGTGCAACTC CAAATAAAAG TAATAATGCA 660 CACCCCCATC ATAATAACAA CCCTCATCTC CCTGACCCTT CCAATTTTTG CCACCCTCAC 720 CAACCCCTAT AAAAAACGTT CATACCCAGA CTACGTAAAA ACAACCGTAA TATATGCTTT 780 TATTACCAGT CTCCCCTCAA CAACCCTATT CATCCTCTCA AACCAAGAAA CAACCATTTG 840 GAGTTGACAT TGAATAACAA CCCAAACATT AGACCTAACA CTAAGCTT 888 s_monkey AAGCTTCACC GGCGCAATGA TCCTAATAAT CGCTCACGGG TTTACTTCGT CTATGCTATT 60 CTGCCTAGCA AACTCAAATT ACGAACGAAT TCACAGCCGA ACAATAACAT TTACTCGAGG 120 GCTCCAAACA CTATTCCCGC TTATAGGCCT CTGATGACTC CTAGCAAATC TCGCTAACCT 180 CGCCCTACCA CCAGCTATTA ATCTAGTAGG AGAATTACTC ACAATCGTAT CTTCCTTCTC 240 TTGATCCAAC TTTACTATTA TATTCACAGG ACTTAATATA CTAATTACAG CACTCTACTC 300 ACTTCATATG TATGCCTCTA CACAGCGAGG TCCACTTACA TACAGCACCA GCAATATAAA 360 ACCAATATTT ACACGAGAAA ATACGCTAAT ATTTATACAT ATAACACCAA TCCTCCTCCT 420 TACCTTGAGC CCCAAGGTAA TTATAGGACC CTCACCTTGT AATTATAGTT TAGCAAAACA 480 TTAGATTGTG AATCTAATAA TAGAAGAATA TACTTCTTAA TTACCGAGAA AGTGCGCAAG 540 AACTGCTAAT TCATGCTCCA AGACTAACAA CTTGGCTTCC TCACTTTTAA AGGATAGTAG 600 TTATCCATTG GTCTTAGGAG CCAAAAAATT GGTGCAACTC CAAATAAAAG TAATAATACA 660 CTTCTCCATC ACTCTAATAA CACTAATTAG CCTACTAGCG CCAATCCTAG CTACCCTCAT 720 TAACCCTAAC AAAAGCACAC TATACCCGTA CTACGTAAAA CTAGCCATCA TCTACGCCCT 780 CATTACCAGT ACCTTATCTA TAATATTCTT TATCCTTACA GGCCAAGAAT CAATAATTTC 840 AAACTGACAC TGAATAACTA TCCAAACCAT CAAACTATCC CTAAGCTT 888 tarsier AAGTTTCATT GGAGCCACCA CTCTTATAAT TGCCCATGGC CTCACCTCCT CCCTATTATT 60 TTGCCTAGCA AATACAAACT ACGAACGAGT CCACAGTCGA ACAATAGCAC TAGCCCGTGG 120 CCTTCAAACC CTATTACCTC TTGCAGCAAC ATGATGACTC CTCGCCAGCT TAACCAACCT 180 GGCCCTTCCC CCAACAATTA ATTTAATCGG TGAACTGTCC GTAATAATAG CAGCATTTTC 240 ATGGTCACAC CTAACTATTA TCTTAGTAGG CCTTAACACC CTTATCACCG CCCTATATTC 300 CCTATATATA CTAATCATAA CTCAACGAGG AAAATACACA TATCATATCA ACAATATCAT 360 GCCCCCTTTC ACCCGAGAAA ATACATTAAT AATCATACAC CTATTTCCCT TAATCCTACT 420 ATCTACCAAC CCCAAACTAA TTATAGGAAC CATGTACTGT AAATATAGTT TAAAAAAACA 480 TTAGATTGTG AGTCTAATAA TAGAAGCCCA AGTTTCTTAT TTACCAAGAA AGTATGCAAG 540 AACTGCTAAC TCATGCCCCA TATATAACAA TGTGGCTTTC TTACTTTTAA AGGATAGAAG 600 TAATCCATCG GTCTTAGGAA CCGAAAAATT GGTGCAACTC CAAATAAAAG TAATATTATT 660 TTCATCCTCC ATTTTACTAT CACTTACACT CTTAATTACC CCATTTATTA TTACAACAAC 720 TAAAAAATAT GAAACACATG CATACCCTTA CTACGTAAAA AACTCTATCG CCTGCGCATT 780 TATAACAAGC CTAGTCCCAA TGCTCATATT TCTATACACA AATCAAGAAA TAATCATTTC 840 CAACTGACAT TGAATAACGA TTCATACTAT GAAATTATGC CTAAGCTT 888 lemur AAGCTTCATA GGAGCAACCA TTCTAATAAT CGCACATGGC CTTACATCAT CCATATTATT 60 CTGTCTAGCC AACTCTAACT ACGAACGAAT CCATAGCCGT ACAATACTAC TAGCACGAGG 120 GATCCAAACC ATTCTCCCTC TTATAGCCAC CTGATGACTA CTCGCCAGCC TAACTAACCT 180 AGCCCTACCA CCCTCTATCA ATTTAATTGG CGAACTATTC GTCACTATAG CATCCTTCTC 240 ATGATCAAAC ATTACAATTA TCTTAATAGG CTTAAATATG CTCATCACCG CTCTCTATTC 300 CCTCTATATA TTAACTACTA CACAACGAGG AAAACTCACA TATCATTCGC ACAACCTAAA 360 CCCATCCTTT ACACGAGAAA ACACCCTTAT ATCCATACAC ATACTCCCCC TTCTCCTATT 420 TACCTTAAAC CCCAAAATTA TTCTAGGACC CACGTACTGT AAATATAGTT TAAAAAAACA 480 CTAGATTGTG AATCCAGAAA TAGAAGCTCA ACCTTCTTAT TTACCGAGAA AGTATGTATG 540 AACTGCTAAC TCTGCACCCG TATATAAAAA TACGGCTATC TCACTTTTAA AGGATAGAAG 600 TAATCCATTG GCCTTAGGAG CCAAAAAATT GGTGCAACTC CAAATAAAAG TAATACTATT 660 ATCCTCTTTC ACCCTTGTCA CACTGATTAT CCTAACTTTA CCTATCATTA TAAACGTTAC 720 AAACATATAC AAAAACTACC CCTATGCACC ATACGTAAAA TCTTCTATTG CATGTGCCTT 780 CATCACTAGC CTCATCCCAA CTATATTATT TATCTCCTCA GGACAAGAAA CAATCATTTC 840 CAACTGACAT TGAATAACAA TCCAAACCCT AAAACTATCT ATTAGCTT 888 _____________________________________________________________ 9 888 _____________________________________________________________ 9 888 G G 4 3 123123123123123123123123123123123123123123123123123123123123 123123123123123123123123123123123123123123123123123123123123 123123123123123123123123123123123123123123123123123123123123 123123123123123123123123123123123123123123123123123123123123 123123123123123123123123123123123123123123123123123123123123 123123123123123123123123123123123123123123123123123123123123 123123123123123123123123123123123123123123123123123123123123 1231231231231231231231231231231231231 444444444444444444444444444444444444444444444444444444444444 444444444444444444444444444444444444444444444444444444444444 444444444444444444444444444444444444444444444444444444444444 44444444444 444 123123123123123123123123123123123123123123123123123123123123 123123123123123123123123123123123123123123123123123123123123 123123123123123123123123123123123123123123123123123123123123 12312312312312312312312312312312312312312312312312312312 _____________________________________________________________ NOTE -- The last three sites in the tRNA segment was misspecified as a codon: 444 was incorrectly specied as 123, so that results for models involving "C" in Yang (1995. A space-time process model for the evolution of DNA sequences. Genetics 139: 993-1005) were inaccurate.