5. dos Reis M, Thawornwattana Y, Angelis K, Telford JM, Donoghue CJP, Yang Z. (2015) Uncertainty in the timing of origin of animals and the limits of precision in molecular timescales Current Biology. [Accepted] [Abstract]
4. Paraskevis D1, Angelis K1,
Magiorkinis G, Kostaki E, Ho S2, Hatzakis A2.
(2015) Dating the origin of hepatitis B virus reveals higher
substitution rate and viral adaptation to the branch leading to F/H genotypes.
Molecular Phylogenetics and Evolution. 93: 44-54.
[doi]
1,2equally contributed
3. Angelis K and dos Reis M. (2015) The Impact of Ancestral Population Size and Incomplete Lineage Sorting on Bayesian Estimation of Species Divergence Times. Current Zoology. [In press] [pdf]
2. Angelis K, Albert J, Mamais I, Magiorkinis G, Hatzakis A, Hamouda O, Struck D, Vercauteren J, Wensing AMJ, Alexiev I, Åsjö B, Balotta C, Camacho RJ, Coughlan S, Griskevicius A, Grossman Z, Horban A, Kostrikis LG, Lepej S, Liitsola K, Linka M, Nielsen C, Otelea D, Paredes R, Poljak M, Puchhammer-Stöckl E, Schmit JC, Sönnerborg A, Staneková D, Stanojevic M, Boucher CAB, Kaplan L, Vandamme AM, Paraskevis D. (2014) Global dispersal pattern of HIV-1 CRF01_AE: A genetic trace of human mobility related to heterosexual activities centralized in South-East Asia. Journal of Infectious diseases. 211:1735–1744. [doi]
1. Angelis K, dos Reis M and Yang Z. (2014) Bayesian estimation of nonsynonymous/synonymous rate ratios for pairwise sequence comparisons. Molecular Biology and Evolution. 1(7):1902-13. [doi]
Angelis K, dos Reis M, Yang Z. (2015) An evaluation of different partitioning strategies for Bayesian estimation of species divergence times. [Abstract]
Magiorkinis G, Angelis K, Mamais I, Katzourakis A, Hatzakis A, Albert J, Lawyer G, Hamouda O, Struck D, Vercauteren J, Wensing AMJ, Alexiev I, Åsjö B, Balotta C, Camacho RJ, Coughlan S, Griskevicius A, Grossman Z, Horban A, Kostrikis LG, Lepej S, Liitsola K, Linka M, Nielsen C, Otelea D, Paredes R, Poljak M, Puchhammer-Stöckl E, Schmit JC, Sönnerborg A, Staneková D, Stanojevic M, Boucher CAB on behalf of the SPREAD program, Nikolopoulos G, Friedman SR, Vandamme AM, Paraskevis D. (2015) The global spread of HIV-1 subtype B epidemic. [Abstract]